Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015912782.1_cds_XP_016462874.1_56050
CDS Infomation

[gene=LOC107785957] [db_xref=GeneID:107785957] [protein=uncharacterized protein LOC107785957 isoform X4] [protein_id=XP_016462874.1] [location=join(33649..33753,36770..36973,37047..37228,38620..38746,38842..39039,40754..41611,41780..41887,42285..42358,43358..43409,43492..43578,43660..43694,46128..46137)] [gbkey=CDS]
Sequence

ATGGCATCTTCACATAAAGAACTGGAACAACAGCTCGTCGAAGCTGGAAACAAGCTTCTT
CAGCCCATTTCTTCGGTTGACGATGAACTCCTTTTGTTACTCGACCGAGTGGAGTCTTGC
CTGTCTAGAGTGGAGCAATCACCAGCCATATCCATGCATGGTGCACTTTCTCCGCTAATG
AAGGCATTGGTAGCAGATGAACTCCTAAGGCATTCGGACGTTGATGTGAAGGTCGCTGTT
GCTTCTTGTGTATCTGAAATAACTAGAATTTCTGCTCCAGACGCTCCATACGATGATGAC
AAAATGAAGGATGTCTTTCAATTAATTGTTTCATCCTTTGAGAATTTTCATGACGAGTGC
AGCAGATCATATAGTAGAAGGGCCTTGGTCCTTGAGACTGTGGCCAAGGTCAGGTCATGT
GTCATCATGCTTGATCTAGAATGTGATAGGCTCATAACAGAGATGTTTCAGCATTTCCTT
AAAGAGATAAGAGATTTTCATTCGGAGGCTATATTCACATATATGGCCACGATAATGACT
GTTGTGTTGGAAGAAAGTGAAGAAGTAACTATGGAACTGCTTACCCCGCTGCTGGCTACT
GTAAAAAAGCACAGCAAGGAGGTGACGCCCATTGCTAAGAAGTTGGTGAAGACAGTATTT
GCAAATTGTGCACCCAAGCTCAAACCTTACCTGGCACAAGCAGTTGAATCATTAGACCTT
TCTTTGGATGAGTACAGCAAATCCCTGACCTCTGTGTTGGAAGGGACTCATATAGCTGTT
GAGCTTGGCAATGACATTTCCTTAAGAAACCAATTGATGGCTGAGAGTGTCAGAGAAGAG
GCATGCTCTGATGATGTTGACCATGCTGTTAATAAATCTTCAAAGTCCATCACAAGTAAT
GGTGTTAGTGAAAGAAACAGGGAATCTGCTGCTCAAACAGATTCGTTGATTAAGGTCGAG
AATCATGATAGTGGGGATCTGCAAGATGCTGCTGCTAAGATGACATCCAAGTCTGATTCT
GATGATTCAATGGTTGAGAAGTCAATGCAATCGGAGTCTAGGTCAGCACAAGCTGCTAAG
GAAAGTGCAAAGAAGGCAAACTCTTTAATAAACTCAGCTGAATCTTCTTTTCAAGCTCCT
GGCGACAATGAAAAAGAAGCCGAGGAGCTTCCAGAATGCAGGAAAAATCAAAATAGCGAT
TCTGAAAGTTCCACTTCTGATGACCCAGCTTGTGAGGGATTCAACTCTTTGGAGAAGAAA
ATAGAAGCTAACCTTCAGCATTATACGCCAAAAGAATCTGAGGGAGAAGCTATAAATGTA
GCTCCGATATCTCCAAGTCAGAGCGTTGCTGACGAGTGTGTCCGAAAAAAGGCTGGTCGT
GGTCGGCCAAAGAAGAAAAAAAGCTCGAATAAAAAACAGTGTGTGTCTAAGGAGGTATCT
GAAGGTACAAAACACTTAGAAGCAAAGCAGGTCAGTCGCCCTTCCGAGGAAGCCCCTTTA
GAGCCTTCTCACGAGGAAAAAGAAGATGGCTCCTCCAGTGACGCGGAGGCAATAACGCCG
AAGCAGTTGGGTAAGAAGAATGAACCGAGGGTTAAGAGTCAGAGTCAGAGCCAGGATGAC
CCCTCTACGAAAAAGGACGATGGCAAAAAGCGTGCTCCTGCAAAAGCTAGGCTGGAGAGC
ATACCTTCACCGGATTCTCCTGATAAGCCTGCTAAAGATGAAGGTAACCAAGAGGAAACC
ACAAAGAGTGCAAAGAGAAAACGGTCGTCTGGTAAGGACAGGGCAACAGAGGATGTGCAA
TATGATGAAAGCCTGGTTGGTTTAAAAGTTAAAGTTTGGTGGCCATATGATCGATCATTC
TATGAAGGTGTTATTAGTGCCTTTGATTCTGGCAAAAGAAAGCACACTGTTTCATATGAT
GATGGAGAAACAGAAGTATTAAATCTCAGAAAGGAACGGTGGGAATTCATTCAAGGAGAT
GAAGTGTCAGAAGAGGATCAAATTGCAAGTCCAGATGTGTCATCAGTAGTAAAGATGTGA

Peptide Sequence

PEP ID

XP_016462874.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107785957 isoform X4 [Nicotiana tabacum]
Sequence

MASSHKELEQQLVEAGNKLLQPISSVDDELLLLLDRVESCLSRVEQSPAISMHGALSPLM
KALVADELLRHSDVDVKVAVASCVSEITRISAPDAPYDDDKMKDVFQLIVSSFENFHDEC
SRSYSRRALVLETVAKVRSCVIMLDLECDRLITEMFQHFLKEIRDFHSEAIFTYMATIMT
VVLEESEEVTMELLTPLLATVKKHSKEVTPIAKKLVKTVFANCAPKLKPYLAQAVESLDL
SLDEYSKSLTSVLEGTHIAVELGNDISLRNQLMAESVREEACSDDVDHAVNKSSKSITSN
GVSERNRESAAQTDSLIKVENHDSGDLQDAAAKMTSKSDSDDSMVEKSMQSESRSAQAAK
ESAKKANSLINSAESSFQAPGDNEKEAEELPECRKNQNSDSESSTSDDPACEGFNSLEKK
IEANLQHYTPKESEGEAINVAPISPSQSVADECVRKKAGRGRPKKKKSSNKKQCVSKEVS
EGTKHLEAKQVSRPSEEAPLEPSHEEKEDGSSSDAEAITPKQLGKKNEPRVKSQSQSQDD
PSTKKDDGKKRAPAKARLESIPSPDSPDKPAKDEGNQEETTKSAKRKRSSGKDRATEDVQ
YDESLVGLKVKVWWPYDRSFYEGVISAFDSGKRKHTVSYDDGETEVLNLRKERWEFIQGD
EVSEEDQIASPDVSSVVKM

Transcript Sequence

Gene sequence data has not been registered.